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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2025-05-26gnu: packages: Remove redundant (gnu packages golang) from some modules.Sharlatan Hellseher
2025-05-26gnu: Rename clipper to clipper-peak.nomike
2025-05-21gnu: r-anpan: Update to 0.3.0-1.efd4dc4.Ricardo Wurmus
2025-05-13gnu: packages: Fix broken descriptions.Sergey Trofimov
2025-05-13gnu: Add r-anglemania.Ricardo Wurmus
2025-05-12gnu: r-chromunity: Update to 0.0.2-2.101e30a.Ricardo Wurmus
2025-05-12gnu: pigx-scrnaseq: Use Snakemake 5.Ricardo Wurmus
2025-05-12gnu: pigx-bsseq: Set HOME.Ricardo Wurmus
2025-05-12gnu: pigx-chipseq: Set HOME.Ricardo Wurmus
2025-05-12gnu: pigx-rnaseq: Set HOME.Ricardo Wurmus
2025-05-12gnu: pigx-sars-cov-2: Use Snakemake 7.Ricardo Wurmus
2025-05-12gnu: pigx-scrnaseq: Use Snakemake 7.Ricardo Wurmus
2025-05-12gnu: pigx-bsseq: Use Snakemake 7.Ricardo Wurmus
2025-05-12gnu: pigx-chipseq: Use Snakemake 7.Ricardo Wurmus
2025-05-12gnu: pigx-rnaseq: Use Snakemake 7.Ricardo Wurmus
2025-05-06gnu: texlive-libkpathsea: Tweak "texmf.cnf" variables.Nicolas Goaziou
2025-05-06gnu: Update TeX Live to 2025.2.Nicolas Goaziou
2025-05-06gnu: Rename `texlive-updmap.cfg' into `texlive-local-tree'.Nicolas Goaziou
2025-05-04gnu: python-muon: Update to 0.1.7.Sharlatan Hellseher
2025-04-29gnu: r-velocyto: Remove deprecated input.Andreas Enge
2025-04-29gnu: Remove variant-tools.Andreas Enge
2025-04-24gnu: python-bed-reader: Improve phases' style.Nicolas Graves
2025-04-19gnu: python-mgatk: Update to 0.7.0.Sharlatan Hellseher
2025-04-16gnu: cnvkit: Update to 0.9.12.Nicolas Graves
2025-04-16gnu: python-decoupler-py: Update to 1.8.0.Sharlatan Hellseher
2025-04-16gnu: python-pysnptools: Fix build and enable tests.Nicolas Graves
2025-04-16gnu: python-bed-reader: Fix build and enable tests.Nicolas Graves
2025-04-16gnu: mageck: Add missing native-inputs.Nicolas Graves
2025-04-16gnu: scregseg: Add missing native-inputs.Nicolas Graves
2025-04-16gnu: umi-tools: Update to 1.1.6.Nicolas Graves
2025-04-16gnu: taxtastic: Update to 0.11.1.Nicolas Graves
2025-04-16gnu: Remove python-pyfasta.Nicolas Graves
2025-04-16gnu: seqmagick: Update to 0.8.6-0.dee6ab9.Nicolas Graves
2025-04-16gnu: rseqc: Switch to pyproject-build-system.Nicolas Graves
2025-04-16gnu: python-pyvcf: Use the fork python-pyvcf3.Nicolas Graves
2025-04-16gnu: python-ont-fast5-api: Update to 4.1.3.Sharlatan Hellseher
2025-04-16gnu: python-iced: Update to 0.5.13.Sharlatan Hellseher
2025-04-16gnu: python-peaks2utr: Update to 1.4.1 and fix build.Sharlatan Hellseher
2025-04-16gnu: python-gffutils: Update to 0.13 and fix build.Sharlatan Hellseher
2025-04-16gnu: python-parabam: Add a maintenance note.Sharlatan Hellseher
2025-04-16gnu: python-pegasusio: Update to 0.9.1.Nicolas Graves
2025-04-16gnu: python-cell2cell: Update to 0.7.4.Nicolas Graves
2025-04-16gnu: crossmap: Add missing python-pyparsing native-input.Nicolas Graves
2025-04-16gnu: python-bx-python: Update to 0.13.0.Nicolas Graves
2025-04-16gnu: pairadise: Add missing native-inputs.Nicolas Graves
2025-04-16gnu: python-biom-format: Update to 2.1.16.Nicolas Graves
2025-04-16gnu: python-biopython-1.73: Make compatible with Python 3.11.Ricardo Wurmus
2025-04-16gnu: python-biopython: Update to 1.85.Ricardo Wurmus
2025-04-16gnu: bedtools: Update to 2.31.1.Ricardo Wurmus
2025-04-16gnu: python-pysam: Update to 0.23.0.Ricardo Wurmus
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