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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2026-04-06gnu: delly: Update to 1.7.3.Hugo Buddelmeijer
2026-04-02gnu: r-bpcells: Do not build bundled highway library.Ricardo Wurmus
2026-03-28gnu: python-pysam: Update to 0.23.3.Nicolas Graves
2026-03-25gnu: cnvkit: Update to 0.9.13.Andreas Enge
2026-03-24gnu: cwltool: Update to 3.1.20260315121657.Arun Isaac
2026-03-23gnu: bpp-core: Build with default gcc.Efraim Flashner
2026-03-23gnu: skewer: Relabel as version 0.2.2.Efraim Flashner
2026-03-23gnu: skewer: Build with default gcc.Efraim Flashner
2026-03-20gnu: jellyfish: Fix build on python-3.12.Nicolas Graves
2026-03-20gnu: python-schema-salad: Update to 8.9.20251102115403.Nicolas Graves
2026-03-20gnu: Reference the inherited inputs values.Ludovic Courtès
2026-03-20gnu: Reference the inherited ‘arguments’ value.Ludovic Courtès
2026-03-19gnu: plink: Build with gcc-7.Efraim Flashner
2026-03-19gnu: plink: Add missing input.Efraim Flashner
2026-03-18gnu: python-metacells: Fix build.Hugo Buddelmeijer
2026-03-18gnu: Remove fastx-toolkit.Andreas Enge
2026-03-18gnu: deacon: Update to 0.15.0.Spencer King
2026-03-18gnu: r-voltron: Update to 0.2.5.Ricardo Wurmus
2026-03-18gnu: Add r-voltronstore.Ricardo Wurmus
2026-03-12gnu: python-decoupler: Update to 2.1.4.Ricardo Wurmus
2026-03-12gnu: python-cell2cell: Update to 0.8.4.Ricardo Wurmus
2026-03-12gnu: python-gseapy: Update to 1.1.12.Ricardo Wurmus
2026-03-12gnu: Add deacon.Spencer King
2026-03-07gnu: r-singlet: Update to 0.99.8-1.ef4a374.Ricardo Wurmus
2026-03-07gnu: r-voltron: Replace custom phase with #:skipped-tests.Ricardo Wurmus
2026-03-06gnu: bwa: Update to 0.7.19.Spencer King
2026-03-05gnu: Pin old pybind11 version.Gabriel Wicki
2026-02-27gnu: Deprecate swig and swig-next in vafor of swig-4.0 and swig-4.4.Sharlatan Hellseher
2026-02-25gnu: wfmash: Install split_approx_mappings_in_chunks script.Arun Isaac
2026-02-24gnu: lammps-serial: Finalize update to 250722.3.Leo Orveillon
2026-02-24gnu: lammps: Update to 250722.3 and refacto.Leo Orveillon
2026-02-23gnu: Remove wfa2-lib.Andreas Enge
2026-02-23gnu: Remove vcflib.Andreas Enge
2026-02-23gnu: Remove freebayes.Andreas Enge
2026-02-20gnu: r-voltron: Skip bad tests.Ricardo Wurmus
2026-02-20gnu: r-giotto: Update to 4.2.2-1.7988300.Ricardo Wurmus
2026-02-20gnu: Add r-giottovisuals.Ricardo Wurmus
2026-02-20gnu: Add r-giottodata.Ricardo Wurmus
2026-02-20gnu: Add r-giottoutils.Ricardo Wurmus
2026-02-20gnu: Add r-giottoclass.Ricardo Wurmus
2026-02-20gnu: r-anndatar: Update to 1.0.1.Ricardo Wurmus
2026-02-20gnu: r-voltron: Update to 0.2.3.Ricardo Wurmus
2026-02-20gnu: r-imagearray: Update to 0.99.6-1.2f90694.Ricardo Wurmus
2026-02-20gnu: r-hdf5dataframe: Update to 0.99.3-1.61c52cb.Ricardo Wurmus
2026-02-19gnu: blast+: Add 'sqlite' dependency.Simon Tournier
2026-02-18gnu: bandage: Support Wayland.Danny Milosavljevic
2026-02-17gnu: Remove tophat.Andreas Enge
2026-02-15gnu: Remove pin on go-1.23 by setting -vet=off in tests.Ethan Blanton
2026-02-14gnu: r-saige: Update to 1.5.1-1.7172b7f.Ricardo Wurmus
2026-02-11gnu: Add alignoth.Alexis Simon
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