diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a08d9846cdd..88a4174b28f 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3252,7 +3252,7 @@ and gene expression visualization.") python-scipy python-threadpoolctl python-umap-learn)) - (native-inputs (list pybind11 python-pytest python-setuptools)) + (native-inputs (list pybind11-2 python-pytest python-setuptools)) (home-page "https://github.com/tanaylab/metacells.git") (synopsis "Single-cell RNA Sequencing Analysis") (description "The metacells package implements the improved metacell @@ -23875,7 +23875,7 @@ instruments, or Pacific Biosciences RSII or Sequel sequencers.") (inputs (list curl zlib)) (propagated-inputs - (list pybind11)) + (list pybind11-2)) (home-page "https://github.com/aidenlab/straw") (synopsis "Stream data from .hic files") (description "Straw is library which allows rapid streaming of contact @@ -24006,7 +24006,7 @@ e.g. from GenBank or Gff files, or Biopython SeqRecords.") ;; dependencies. (delete 'sanity-check)))) (native-inputs - (list pybind11 + (list pybind11-2 python-pytest python-pypairix python-setuptools @@ -24072,7 +24072,7 @@ browser.") "-DCMAKE_CXX_FLAGS=\"-I ../vendor/cereal/include/\" -fPIC" "..") (invoke "make"))))))) - (propagated-inputs (list pybind11)) + (propagated-inputs (list pybind11-2)) (native-inputs (list cmake-minimal python-setuptools)) (home-page "https://github.com/nanoporetech/pyspoa") (synopsis "Python bindings for the SIMD partial order alignment library") @@ -24159,7 +24159,7 @@ aligner.") python-scipy python-umap-learn ;; [optional] - pybind11 + pybind11-2 python-hnswlib python-igraph python-louvain)) |