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See https://codeberg.org/guix/guix/pulls/7609#issuecomment-12558714.
* gnu/packages/mpi.scm (openmpi-5): Drop calls to PACKAGE?.
Change-Id: I19254aea9e71773cbbdf9719a129f33a0c153e87
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merges: #7609
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* gnu/packages/mpi.scm (openmpi-5): Explicitly activate PSM2 when present.
Change-Id: I4516553ddc88c68459ae028488927d37ef8c29af
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (hwloc-2)[source]: Switch to git-fetch.
[properties]: Delete.
[arguments]<#:phases>: Remove ’delete-configure and ’move-man3-pages;
add ’move-man-pages.
Merges guix/guix!7434
Change-Id: Id0ae1c858c4dc0d52de45f6a1714cb63019bb7b3
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* gnu/packages/mpi.scm (hwloc-2)[inherit]: Remove field.
[name, build-system, home-page, synopsis, description, license]: Copy
from hwloc.
[inputs, native-inputs, arguments]: Copy from hwloc and incorporate
changes.
Change-Id: I9330782463bc740534bc5f974b18fe987a61f2f4
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* gnu/packages/mpi.scm (hwloc-2): Propagate exposed dependencies.
Merges guix/guix!7284
Change-Id: I1b57896f2c039a8e9ee53eb9990b802ecffac61b
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
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This commit was made by running this command:
sed -e's/modify-inputs (package-\([a-z-]*\)inputs [a-zA-Z0-9-]\+)/modify-inputs \1inputs/g' -i gnu/packages/*.scm
… and then reverting individual hunks where the change would trigger unbound
variable warnings or other issues (such as ‘native-inputs’ is bound in the
body of the ‘inputs’ field, but it refers to the ‘native-inputs’ thunk defined
just above).
Change-Id: I6d94819f2809313fa1fbefc61897502ee7d66fab
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This commit was made by running this command:
sed -e's/substitute-keyword-arguments (package-arguments [a-zA-Z0-9-]\+)/substitute-keyword-arguments arguments/g' -i gnu/packages/*.scm
… and then:
1. reverting changes from ‘gnu/packages/rust.scm’ and
‘gnu/packages/java.scm’ since they would incur derivation changes and/or
breakage;
2. reverting the change for ‘gcc-final’ in ‘gnu/packages/commencement.scm’;
3. reverting the change for ‘onnx-optimizer’, ‘openquest’, and ‘certbot’,
which use ‘substitute-keyword-arguments’ for arguments that are not
inherited (and thus ‘arguments’ would be unbound);
4. reverting the change for ‘insight-toolkit-legacy’ and ‘wine64-staging’
which make bogus assumptions about inherited arguments.
Change-Id: I122a7cf517b6b63cae38944b5d33ade4b1f5a89c
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* gnu/packages/mpi.scm (openmpi-5): New variable.
Merges guix/guix!6032
Change-Id: I2ff58c0f76d861f4570b4d9dd60aefa747a73345
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
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* gnu/packages/mpi.scm (openmpi-4): Don't mix quasiquotes with G-exps.
Merges guix/guix!6032
Change-Id: Ic989184bb25dc3519ea4281cf2c9cac1c18af7a9
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
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* gnu/packages/mpi.scm (hwloc-2): Enable ROCm support.
Merges guix/guix!6032
Change-Id: I68d57c377bf461dd32a2c7b7793ed85158683199
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
Modified-by: Cayetano Santos <csantosb@inventati.org>
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* gnu/packages/mpi.scm (hwloc-2)[origin]: Add patch adding a configure
flag for OpenCL.
[native-inputs]: Add dependencies required to generate configure. Remove
opencl-ic-loader...
[inputs]: ...and move it here.
[arguments]: Use new configure flag. Force configure script generation.
Merges guix/guix!6032
Change-Id: Idd31c6b6efbab9c87f83c5af750a0994518be69a
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
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This commit updates both hwloc packages to use G-exps at the same time
as one inherits on the other and doing it in 2 steps would lead to a
commit with a broken state.
* gnu/packages/mpi.scm (hwloc-1, hwloc-2): Switch to G-expressions.
Merges guix/guix!6032
Change-Id: Ie59b12bb1fb9d7d800449afdbf8cfb44c08ec3e9
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
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* gnu/packages/mpi.scm (hwloc-2)[native-inputs]: Add opencl-headers and
opencl-icd-loader.
[inputs]: Add level-zero and libxml2.
Change-Id: I1af1921c848d8812848e453edac7701c9b1983d2
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* gnu/packages/mpi.scm (hwloc-2): Update to 2.13.0.
Merges guix/guix!6359
Change-Id: I020c86425dcbb83613365448356c7bec0e540b93
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
Modified-by: Cayetano Santos <csantosb@inventati.org>
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* gnu/packages/mpi.scm (openmpi-5): Update to 5.0.9.
Change-Id: If10ce47b8f09cf24cca617bf4556c1587cbde8b1
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/linux.scm (libfabric): Update to 2.3.0.
(libfabric-1): New variable.
* gnu/packages/mpi.scm (openmpi-4)[inputs]: Use ‘libfabric-1’ instead of ‘libfabric’.
(openmpi-5)[inputs]: Replace ‘libfabric-1’ by ‘libfabric’.
Change-Id: I2cd739f1891960b0e8c6125589e3b05c82956353
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* gnu/packages/mpi.scm (python-mpi4py): Update to 4.1.0.
[arguments]<#:phases>: Add 'check phase replacement.
<#:test-flags>: Set them.
[native-inputs]: Replace python-cython-0 by python-cython.
Change-Id: I8d1ab87bdb27607fe73c1865fd5fa3c174421840
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/mpi.scm (python-mpi4py):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments, description]: Improve style.
[native-inputs]: Add python-cython-0, python-pytest,
python-setuptools.
Change-Id: I3d21936ce3dc368d358174a984885f7450032195
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/mpi.scm (make-scorep): Update to 9.0.
[source]: Update URI.
[inputs]: Add cubew, gotcha, libbfd, libiberty.
[native-inputs]: Remove cube.
[arguments]<#:configure-flags>: Adapt.
Change-Id: I832bb5092091080b5544e51c60ca8e3bc27beb12
Signed-off-by: Andreas Enge <andreas@enge.fr>
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* gnu/packages/mpi.scm (hwloc): Update to 2.12.2.
Change-Id: I982b72ff9ea8a2885015e514b3378816668fd280
Signed-off-by: Andreas Enge <andreas@enge.fr>
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* gnu/packages/vnc.scm (turbovnc) [source] <snippet>: Simplify.
* gnu/packages/astronomy.scm (phd2): Likewise.
* gnu/packages/emulators.scm (libretro-dolphin-emu)
(retroarch-minimal): Likewise.
* gnu/packages/golang-web.scm (go-github-com-aws-aws-sdk-go-v2-service-sqs)
(go-go-opentelemetry-io-contrib-propagators-autoprop)
(go-go-opentelemetry-io-otel-exporters-otlp-otlptrace)
(go-go-opentelemetry-io-otel-exporters-otlp-otlptrace-otlptracegrpc)
(go-go-opentelemetry-io-otel-exporters-otlp-otlptrace-otlptracehttp)
(go-go-opentelemetry-io-otel-exporters-zipkin)
(go-go-opentelemetry-io-otel-log, go-go-opentelemetry-io-otel-sdk)
(go-go-opentelemetry-io-otel-sdk-log, go-go-opentelemetry-io-otel-sdk-metric)
(go-google-golang-org-genproto-googleapis-api): Likewise.
* gnu/packages/golang-xyz.scm (go-go-uber-org-zap-exp): Likewise.
* gnu/packages/ipfs.scm (go-github-com-ipfs-shipyard-nopfs-ipfs): Likewise.
* gnu/packages/mpi.scm (openmpi-5): Likewise.
Change-Id: I286ff1e949ccb97f9369f2a172c8559e3884dba7
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gnu/packages/mpi.scm (openmpi-5): Update to 5.0.8.
[arguments]<#:configure-flags>: Add CFLAGS to declare warnings as
non-errors.
Change-Id: I05386e05f374c6e319201cdb64fd0670549d79a1
Signed-off-by: Andreas Enge <andreas@enge.fr>
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* gnu/packages/mpi.scm (openmpi-4)[arguments]: Add CFLAGS to #:configure-flags
to relax gcc-14's strictness.
Change-Id: I4a19a473a729ce054d855ec2c4d6ea94dc94b849
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* gnu/packages/mpi.scm (gotcha): New variable.
Change-Id: Ia78f11ba482cacc0702092ac30462c3d5cc248f7
Reviewed-by: Ludovic Courtès <ludo@gnu.org>
Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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* gnu/packages/mpi.scm (hwloc): Update to 2.12.1.
Change-Id: Ia690274ec823bfe86bcfd2a93faa1cf536e4ee3f
Signed-off-by: Andreas Enge <andreas@enge.fr>
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* gnu/packages/valgrind.scm (valgrind/pinned): Make public.
(valgrind): Delete.
(valgrind-next): Rename to valgrind.
(valgrind/interactive): Inherit from valgrind.
* gnu/packages/audio.scm (codec2),
* gnu/packages/bootloaders.scm (dtc),
* gnu/packages/chromium.scm (ungoogled-chromium),
* gnu/packages/crates-io.scm (rust-crabgrind-0.1),
* gnu/packages/crates-tls.scm (rust-rustls-pki-types-1),
* gnu/packages/file-systems.scm (bindfs),
* gnu/packages/gnome.scm (libratbag, gnome-software),
* gnu/packages/high-availability.scm (pacemaker),
* gnu/packages/linux.scm (multipath-tools),
* gnu/packages/machine-learning.scm (python-pytorch),
* gnu/packages/mpi.scm (openmpi-4),
* gnu/packages/music.scm (stargate),
* gnu/packages/perl-check.scm (perl-test-runvalgrind),
* gnu/packages/prolog.scm (trealla),
* gnu/packages/qt.scm (qtwebengine-5, qt-creator),
* gnu/packages/robotics.scm (aseba),
* gnu/packages/ruby.scm (ruby-ruby-memcheck),
* gnu/packages/spreadsheet.scm (sc-im),
* gnu/packages/web.scm (jq): Rename valgrind to valgrind/pinned.
Change-Id: I9dec25abce643ef6d815a2cc50414c4f65f1e8d3
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* gnu/packages/mpi.scm (mpich): Update to 4.3.0.
[arguments]: Adjust the configure-flags depending on if ucx is an input.
Move the 'check phase to after the 'install phase.
Change-Id: I2dd14703947d1ead4c99a64501ab92b8d4027521
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* gnu/packages/mpi.scm (hwloc): Update to 2.12.0.
Change-Id: I6d35e8da99e98ba18e71df94f4c7f63f69332bb3
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (openmpi-5): Update to 5.0.7.
Change-Id: I017c8979dfb97994a1c4b48fa099abe496548936
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This is a follow-up to 1109bc6858.
* gnu/packages/mpi.scm: Add missing imports.
Change-Id: I9953662e6bc79bd04d60ad7fe88fd17dbde20bc4
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The make-scorep procedure makes use of its argument, a package, at the top
level. Since it is not delayed, it is susceptible to cause top level module
cycles, as it did with the introduction of commit fc27362f8d.
* gnu/packages/profiling.scm (make-scorep, scorep-openmpi): Move to...
* gnu/packages/mpi.scm: ... here.
Change-Id: I7989fb7c3da654f36d8e5e86bc383f02bd577935
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This patch fixes a runtime error when launching an MPI program using
mpiexec/mpirun in an environment where the ssh command is not
available.
* gnu/packages/mpi.scm (openmpi-4)[inputs]: Add openssh-sans-x.
(openmpi-4)[arguments]: Fix path in code.
Change-Id: I65255186c37b6eaba3c283c7046163abc2cb38b7
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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This reduces the installed package size by 63 MiB.
* gnu/packages/mpi.scm (openmpi-5) [source]: Add modules, snippet fields.
Change-Id: Ie3dc365a2e4e48dc4c385dd447d3c64b7db065ca
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* gnu/packages/mpi.scm (openmpi-5): Update to 5.0.6.
Change-Id: I1aed5f0e76d64a215c4a13f445628ec206e31acf
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* gnu/packages/mpi.scm (openmpi-5)[inputs]: Use inherited inputs to only
add ucx when it is supported.
[arguments]: Only add configure-flag for ucx when it is included as an
input.
Change-Id: I4a5fc86999ffbafdb99bd68c170fc7a1fa6a33a5
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* gnu/packages/mpi.scm (openmpi-4)[arguments]: Pass “--disable-static”.
* gnu/packages/mpi.scm (openmpi-5)[arguments]: Likewise.
Change-Id: Ia6a8bc8a88d12a37878a45eed380262759bd4565
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This removes GCC from the direct references of openmpi@5.
* gnu/packages/mpi.scm (openmpi-5)[arguments]: Replace arguments
entirely instead of using ‘substitute-keyword-arguments’. Reintroduce
‘remove-absolute’ phase. Remove ‘find-opensm-headers’ and ‘remove-logs’
phases, which are no longer needed.
Change-Id: Ia3b25230488ca13310cd5bb2ae45f6990e906fa5
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* gnu/packages/mpi.scm (hwloc): Update to 2.11.2.
Change-Id: I19c1b9b073ff55e8174d25a6f11048db34d6acdf
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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%default-gnu-modules.
Until now users would have to cargo cult or inspect the private
%default-modules variable of (guix build-systems gnu) to discover which
modules to include when extending the used modules via the #:modules argument.
The renaming was automated via the command:
$ git grep -l %gnu-build-system-modules
| xargs sed 's/%gnu-build-system-modules/%default-gnu-imported-modules/' -i
* guix/build-system/gnu.scm (%gnu-build-system-modules): Rename to...
(%default-gnu-imported-modules): ... this.
(%default-modules): Rename to...
(%default-gnu-modules): ... this. Export.
(dist-package, gnu-build, gnu-cross-build): Adjust accordingly.
Change-Id: Idef307fff13cb76f3182d782b26e1cd3a5c757ee
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* gnu/packages/mpi.scm (openmpi-4): New variable.
(openmpi): Redefine variable.
Change-Id: If5bb4429c935982ddaa1a5acbd728367ebbfd6fd
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (openmpi-5): New variable.
Change-Id: I048692b2e928077c9cfa9fb8076ceb356251e1db
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (mpich-ofi): New variable.
Change-Id: I577fa8fc15ffe7df82d737721ca5a2e034c1e43a
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (mpich): Update to 4.2.2.
[native-inputs]: Add python-minimal.
Change-Id: I9f3e42cb58c399a89835ac38dcfdd9dd11efe210
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/mpi.scm (hwloc-2): Update to 2.11.1.
[native-inputs]: Add BASH.
Co-authored-by: Philippe SWARTVAGHER <phil.swart@gmx.fr>
Change-Id: If5531cb82911833153b0e795e9f20b0d0ae940c2
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* gnu/packages/mpi.scm (hwloc): Update to 2.10.0.
Change-Id: If3971c18542dd3d2d03fa48f5d440d38c6f827a7
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (hwloc-1)[inputs]: Remove dependency on graphics
libraries when cross-compiling.
Change-Id: I698ac3f8aadda634f6753bdeba0f5fbd77e608df
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* gnu/packages/mpi.scm (openmpi): Update to 4.1.6.
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* gnu/packages/mpi.scm (hwloc-2): Update to 2.9.3.
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* gnu/packages/mpi.scm (openmpi)[arguments]: Pass “--with-pmix=internal”.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/mpi.scm (hwloc-2): Update to 2.9.2.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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