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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2026-03-07gnu: r-singlet: Update to 0.99.8-1.ef4a374.Ricardo Wurmus
2026-03-07gnu: r-voltron: Replace custom phase with #:skipped-tests.Ricardo Wurmus
2026-03-06gnu: bwa: Update to 0.7.19.Spencer King
2026-03-05gnu: Pin old pybind11 version.Gabriel Wicki
2026-02-27gnu: Deprecate swig and swig-next in vafor of swig-4.0 and swig-4.4.Sharlatan Hellseher
2026-02-25gnu: wfmash: Install split_approx_mappings_in_chunks script.Arun Isaac
2026-02-24gnu: lammps-serial: Finalize update to 250722.3.Leo Orveillon
2026-02-24gnu: lammps: Update to 250722.3 and refacto.Leo Orveillon
2026-02-23gnu: Remove wfa2-lib.Andreas Enge
2026-02-23gnu: Remove vcflib.Andreas Enge
2026-02-23gnu: Remove freebayes.Andreas Enge
2026-02-20gnu: r-voltron: Skip bad tests.Ricardo Wurmus
2026-02-20gnu: r-giotto: Update to 4.2.2-1.7988300.Ricardo Wurmus
2026-02-20gnu: Add r-giottovisuals.Ricardo Wurmus
2026-02-20gnu: Add r-giottodata.Ricardo Wurmus
2026-02-20gnu: Add r-giottoutils.Ricardo Wurmus
2026-02-20gnu: Add r-giottoclass.Ricardo Wurmus
2026-02-20gnu: r-anndatar: Update to 1.0.1.Ricardo Wurmus
2026-02-20gnu: r-voltron: Update to 0.2.3.Ricardo Wurmus
2026-02-20gnu: r-imagearray: Update to 0.99.6-1.2f90694.Ricardo Wurmus
2026-02-20gnu: r-hdf5dataframe: Update to 0.99.3-1.61c52cb.Ricardo Wurmus
2026-02-19gnu: blast+: Add 'sqlite' dependency.Simon Tournier
2026-02-18gnu: bandage: Support Wayland.Danny Milosavljevic
2026-02-17gnu: Remove tophat.Andreas Enge
2026-02-15gnu: Remove pin on go-1.23 by setting -vet=off in tests.Ethan Blanton
2026-02-14gnu: r-saige: Update to 1.5.1-1.7172b7f.Ricardo Wurmus
2026-02-11gnu: Add alignoth.Alexis Simon
2026-02-10gnu: Remove PKG_CONFIG_EXECUTABLE configure-flags.Dariqq
2026-02-09gnu: rcas-web: Update to 0.2.0.Ricardo Wurmus
2026-02-07gnu: Remove python-biofluff.Andreas Enge
2026-02-07gnu: scvelo: Relocate phase 'set-numba-cache-dir.Sharlatan Hellseher
2026-02-07gnu: python-ikarus: Update to 0.0.3.Sharlatan Hellseher
2026-02-07gnu: python-celltypist: Update to 1.7.1.Sharlatan Hellseher
2026-02-07gnu: python-scanpy: Skip one more test.Sharlatan Hellseher
2026-02-07gnu: python-splicekit: Refresh package style.Sharlatan Hellseher
2026-02-07gnu: python-pybio: Relocate phase 'set-home.Sharlatan Hellseher
2026-02-07gnu: pairadise: Disable missing tests.Sharlatan Hellseher
2026-02-07gnu: python-tornado: Update to 6.4.2.Sharlatan Hellseher
2026-02-07gnu: Drop setting SETUPTOOLS_SCM_PRETEND_VERSION in some packages.Nicolas Graves
2026-02-07gnu: Remove python-importlib-metadata input from some packages.Nicolas Graves
2026-02-07gnu: Remove python-flake8 native-input from some packages.Nicolas Graves
2026-02-07gnu: python-doubletdetection: Remove python-black native-input.Nicolas Graves
2026-02-07gnu: python-pybedtools: Update to 0.12.0.Sharlatan Hellseher
2026-02-07build-system/pyproject: Remove uneeded use of pyproject-guile-json.Nicolas Graves
2026-02-05gnu: Remove python-multivelo.Simon Tournier
2026-02-04gnu: scvelo: Deprecate in favor of python-scvelo.Nguyễn Gia Phong
2026-02-02gnu: salmon: Update dependency on tbb.Cayetano Santos
2026-01-28gnu: bowtie: Update to 2.5.4.Cayetano Santos
2026-01-25gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.Ricardo Wurmus
2026-01-25gnu: r-pizzarr: Update to 0.1.0-2.5f47057.Ricardo Wurmus
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