diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/astronomy.scm | 135 |
1 files changed, 70 insertions, 65 deletions
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 69a0d5a5836..a024a0b5507 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4619,26 +4619,31 @@ milliarcsecond).") (package (name "python-jwst") (version "1.17.1") - (source (origin - (method url-fetch) - (uri (pypi-uri "jwst" version)) - (sha256 - (base32 - "0brlj2w0jjg9p4zwna05bk9l8nb7xkcss7p5rjdjaj3hxlskzfkq")) - (modules '((guix build utils))) - (snippet - '(begin - ;; Replace reference to external configobj. - (substitute* (find-files "." "\\.py$") - (("from astropy.extern import configobj") "import configobj") - (("from astropy.extern.configobj import validate") "import validate") - (("from astropy.extern.configobj.configobj import ") "from configobj import ") - (("from astropy.extern.configobj.validate import ") "from validate import ")))))) + (source + (origin + (method url-fetch) + (uri (pypi-uri "jwst" version)) + (sha256 + (base32 + "0brlj2w0jjg9p4zwna05bk9l8nb7xkcss7p5rjdjaj3hxlskzfkq")) + (modules '((guix build utils))) + (snippet + #~(begin + ;; Replace reference to external configobj. + (substitute* (find-files "." "\\.py$") + (("from astropy.extern import configobj") + "import configobj") + (("from astropy.extern.configobj import validate") + "import validate") + (("from astropy.extern.configobj.configobj import ") + "from configobj import ") + (("from astropy.extern.configobj.validate import ") + "from validate import ")))))) (build-system pyproject-build-system) (arguments (list - ;; XXX: Tests require access to https://jwst-crds-pub.stsci.edu server for - ;; getting data sets. + ;; XXX: Tests require access to https://jwst-crds-pub.stsci.edu server + ;; for getting data sets. #:tests? #f #:phases #~(modify-phases %standard-phases @@ -4654,59 +4659,59 @@ milliarcsecond).") ;; XXX: Can't detect opencv-python version. The input opencv ;; might not set the version correctly. ((".*opencv-python-headless.*") "") - ;; jwst.csv_tools was removed. + ;; Remove broken scripts, see + ;; <https://github.com/spacetelescope/jwst/issues/9401>. (("csvconvert = .*") "") - ;; ImportError: module 'jwst.scripts.asn_gather' has no - ;; attribute 'main' (("asn_gather = .*") ""))))))) - ;; opencv provides OpenCV-Python which is Listed as install requirement. - (propagated-inputs (list opencv - python-asdf - python-asdf-astropy - python-astropy - python-bayesicfitting - python-crds - python-drizzle - python-gwcs - python-importlib-metadata - python-jplephem - python-jsonschema - python-numpy - python-packaging - python-photutils - python-poppy - python-psutil - python-pyparsing - python-pysiaf - python-requests - python-scikit-image - python-scipy - python-spherical-geometry - python-stcal - python-stdatamodels - python-stpipe - python-stsci-imagestats - python-synphot - python-tweakwcs - python-wiimatch)) - (native-inputs (list python-colorama - python-pytest - python-pytest-cov - python-pytest-doctestplus - python-pytest-openfiles - python-requests-mock - ;; python-ruff ; not packed yet in Guix - python-setuptools - python-setuptools-scm - python-wheel)) + (native-inputs + (list python-colorama + python-pytest + python-pytest-cov + python-pytest-doctestplus + python-pytest-openfiles + python-requests-mock + python-setuptools + python-setuptools-scm + python-wheel)) + (propagated-inputs + ;; opencv provides OpenCV-Python which is Listed as install requirement. + (list opencv + python-asdf + python-asdf-astropy + python-astropy + python-bayesicfitting + python-crds + python-drizzle + python-gwcs + python-importlib-metadata + python-jplephem + python-jsonschema + python-numpy + python-packaging + python-photutils + python-poppy + python-psutil + python-pyparsing + python-pysiaf + python-requests + python-scikit-image + python-scipy + python-spherical-geometry + python-stcal + python-stdatamodels + python-stpipe + python-stsci-imagestats + python-synphot + python-tweakwcs + python-wiimatch)) (home-page "https://jwst-pipeline.readthedocs.io/en/latest/") - (synopsis - "Python library for science observations from the James Webb Space Telescope") + (synopsis "Science observations from the James Webb Space Telescope") (description "This package provides an access to the JWST Science Calibration Pipeline -processes data from all JWST instruments and observing modes by applying various -science corrections sequentially, producing both fully-calibrated individual -exposures and high-level data products (mosaics, extracted spectra, etc.).") +processes data from all JWST instruments and observing modes by applying +various science corrections sequentially, producing both fully-calibrated +individual exposures and high-level data products (mosaics, extracted spectra, +etc.).") (license license:bsd-3))) (define-public python-jwst-reffiles |