diff options
| author | Nicolas Graves <ngraves@ngraves.fr> | 2025-12-29 09:26:18 +0100 |
|---|---|---|
| committer | Sharlatan Hellseher <sharlatanus@gmail.com> | 2025-12-31 13:53:03 +0000 |
| commit | f0a4086fadc93b17511d33f564e88c9c9de36bb3 (patch) | |
| tree | 786f1ad0d2bd67381ec9c62568836efffa49c188 /gnu | |
| parent | b20b339faddca6d4173005fc1e45dac4daaff53a (diff) | |
gnu: tadbit: Switch to pyproject.
* gnu/packages/bioinformatics.scm (tadbit):
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-backend, #:test-flags>: Migrate from 'check phase.
[native-inputs]: Add python-setuptools.
Change-Id: Ib32b92c308fae375095c0c3a14df1c8bea1f7969
Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 13 |
1 files changed, 6 insertions, 7 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index ab1e3a9a3c8..71c48454163 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -16242,9 +16242,11 @@ applications for tackling some common problems in a user-friendly way.") (sha256 (base32 "07q0alxah6xl1hibaj1kj7pdzq3pg6csyapsihbwlbmqyfmllbgz")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments (list + #:test-backend #~'custom + #:test-flags #~(list "test/test_all.py") #:phases #~(modify-phases %standard-phases ;; Scipy 1.12 no longer has binom_test or polyfit @@ -16273,15 +16275,12 @@ applications for tackling some common problems in a user-friendly way.") (string-append "(\"" #$output "/etc/bash_completion.d\"")) (("extras/\\.bash_completion") - "extras/tadbit")))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "python3" "test/test_all.py"))))))) + "extras/tadbit"))))))) (native-inputs (list `(,glib "bin") ;for gtester glib - pkg-config)) + pkg-config + python-setuptools)) (inputs ;; TODO: add Chimera for visualization (list imp |