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| author | Efraim Flashner <efraim@flashner.co.il> | 2026-03-23 11:36:33 +0200 |
|---|---|---|
| committer | Efraim Flashner <efraim@flashner.co.il> | 2026-03-23 13:58:44 +0200 |
| commit | c7d24e6fbe00286b6862c4de65a9276344e44dc6 (patch) | |
| tree | 826549998634cf4c2c0b01b077797aa47fedb631 /gnu | |
| parent | 0bdb5c58ccf892c5ad384ddff7bed3aedd0f2940 (diff) | |
gnu: skewer: Relabel as version 0.2.2.
This is the tag for the given commit.
* gnu/packages/bioinformatics.scm (skewer)[version]: Set to 0.2.2.
Change-Id: I7f24b0320b5e20ba36e56c0a0708ea64ec7ba86a
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 60 |
1 files changed, 29 insertions, 31 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5761ce0080a..544de8bac84 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -16377,40 +16377,38 @@ browser.") "The contents of this package are free for all uses.")))) (define-public skewer - (let ((commit "978e8e46cba44595ece623e5387749284a86b74b") - (revision "1")) - (package - (name "skewer") - (version (git-version "0" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/relipmoc/skewer") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1b3skfnj3zmd2065fiyxjrg4k6xsxfy6nxz80vmajd830mk6vr69")))) - (build-system gnu-build-system) - (arguments - (list - #:tests? #f - #:make-flags - #~(list "CXXFLAGS=-std=c++11 -c -O2") - #:phases - #~(modify-phases %standard-phases - (delete 'configure) - (replace 'install - (lambda _ - (install-file "skewer" (string-append #$output "/bin"))))))) - (home-page "https://github.com/relipmoc/skewer") - (synopsis "Bit-masked k-difference matching") - (description "Skewer implements the bit-masked k-difference matching + (package + (name "skewer") + (version "0.2.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/relipmoc/skewer") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1b3skfnj3zmd2065fiyxjrg4k6xsxfy6nxz80vmajd830mk6vr69")))) + (build-system gnu-build-system) + (arguments + (list + #:tests? #f + #:make-flags + #~(list "CXXFLAGS=-std=c++11 -c -O2") + #:phases + #~(modify-phases %standard-phases + (delete 'configure) + (replace 'install + (lambda _ + (install-file "skewer" (string-append #$output "/bin"))))))) + (home-page "https://github.com/relipmoc/skewer") + (synopsis "Bit-masked k-difference matching") + (description "Skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.") - (license license:expat)))) + (license license:expat))) (define-public f-seq (let ((commit "6ccded34cff38cf432deed8503648b4a66953f9b") |
