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authorNicolas Graves <ngraves@ngraves.fr>2025-09-28 18:06:44 +0200
committerSharlatan Hellseher <sharlatanus@gmail.com>2025-09-28 19:23:54 +0100
commit9cd4bdd30a991a524111d2a88592dd3c59fb8eaf (patch)
tree352ff9ba030b48f51ed2ebd174a94f086bd5754d /gnu
parentc608175c5d6fd750c3bb812142016679821c2bfd (diff)
gnu: python-mpi4py: Update to 4.1.0.
* gnu/packages/mpi.scm (python-mpi4py): Update to 4.1.0. [arguments]<#:phases>: Add 'check phase replacement. <#:test-flags>: Set them. [native-inputs]: Replace python-cython-0 by python-cython. Change-Id: I8d1ab87bdb27607fe73c1865fd5fa3c174421840 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/mpi.scm30
1 files changed, 20 insertions, 10 deletions
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm
index 694aac33546..ea5cc62b396 100644
--- a/gnu/packages/mpi.scm
+++ b/gnu/packages/mpi.scm
@@ -530,7 +530,7 @@ only provides @code{MPI_THREAD_FUNNELED}.")))
(define-public python-mpi4py
(package
(name "python-mpi4py")
- (version "3.1.4")
+ (version "4.1.0")
(source
(origin
(method git-fetch)
@@ -539,21 +539,31 @@ only provides @code{MPI_THREAD_FUNNELED}.")))
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "1iy6087w7r2ip2kzinvfvjvqy7idbk0jn9ing44q1ggmgk2kx8sc"))))
+ (base32 "1r4n2d3nacpa6sq18jp0xk4a81ha0iipgvlsdv0bhfmdvgpv2vqy"))))
(build-system pyproject-build-system)
(arguments
(list
+ #:test-flags
+ #~(list ;; MPI errors are unrecoverable.
+ "--ignore=test/test_spawn.py"
+ "--ignore=test/test_util_pool.py"
+ "--ignore=demo/futures/test_futures.py")
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'mpi-setup #$%openmpi-setup)
- (add-before 'check 'pre-check
- (lambda _
- ;; Skip BaseTestSpawn class (causes error 'ompi_dpm_dyn_init()
- ;; failed --> Returned "Unreachable"' in chroot environment).
- (substitute* "test/test_spawn.py"
- (("unittest.skipMPI\\('openmpi\\(<3.0.0\\)'\\)")
- "unittest.skipMPI('openmpi')")))))))
- (native-inputs (list python-cython-0 python-pytest python-setuptools))
+ (add-before 'check 'pre-check
+ (lambda _
+ ;; Skip BaseTestSpawn class (causes error 'ompi_dpm_dyn_init()
+ ;; failed --> Returned "Unreachable"' in chroot environment).
+ (substitute* "test/test_spawn.py"
+ (("unittest.skipMPI\\('openmpi\\(<3.0.0\\)'\\)")
+ "unittest.skipMPI('openmpi')"))))
+ (replace 'check
+ (lambda* (#:key tests? test-flags #:allow-other-keys)
+ (if tests?
+ (apply invoke "mpiexec" "pytest" "-vv" test-flags)
+ (format #t "test suite not run~%")))))))
+ (native-inputs (list python-cython python-pytest python-setuptools))
(inputs (list openmpi))
(properties '((updater-extra-inputs "openmpi")))
(home-page "https://github.com/mpi4py/mpi4py")