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| author | Ricardo Wurmus <rekado@elephly.net> | 2025-03-03 14:46:41 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2025-03-03 14:46:41 +0100 |
| commit | 70e007c91e2e6dd0e39b55010926ae5e2b626153 (patch) | |
| tree | de29f7b894ecf16eb55a416f4966e7650f41f571 /gnu | |
| parent | 916be45e70d39de8e300e7f1abd07eab5a6a567f (diff) | |
gnu: Add r-grandr.
* gnu/packages/cran.scm (r-grandr): New variable.
Change-Id: Ib11e4ba8db31ffe176c1e6ae753125a88d850299
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/cran.scm | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3ad2d47247e..81938b2dadf 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4765,6 +4765,45 @@ regions. GAs can be run sequentially or in parallel, using an explicit master-slave parallelisation or a coarse-grain islands approach.") (license license:gpl2+))) +(define-public r-grandr + (package + (name "r-grandr") + (version "0.2.6") + (source + (origin + (method url-fetch) + (uri (cran-uri "grandR" version)) + (sha256 + (base32 "058cvcjrqhgm14vyhlm1mdhs3z0kfpjlfc3msadsvlhlb7p676sn")))) + (properties `((upstream-name . "grandR"))) + (build-system r-build-system) + (propagated-inputs (list r-cowplot + r-ggplot2 + r-labeling + r-lfc + r-mass + r-matrix + r-minpack-lm + r-numderiv + r-patchwork + r-plyr + r-rcurl + r-reshape2 + r-rlang + r-scales)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/erhard-lab/grandR") + (synopsis + "Comprehensive analysis of nucleotide conversion sequencing data") + (description + "Nucleotide conversion sequencing experiments have been developed to add +a temporal dimension to RNA-seq and single-cell RNA-seq. Such experiments +require specialized tools for primary processing such as GRAND-SLAM, and +specialized tools for downstream analyses. @code{grandR} provides a +comprehensive toolbox for quality control, kinetic modeling, differential gene +expression analysis and visualization of such data.") + (license license:asl2.0))) + (define-public r-greg (package (name "r-greg") |
