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| author | Ricardo Wurmus <rekado@elephly.net> | 2026-01-26 13:51:31 +0100 |
|---|---|---|
| committer | Andreas Enge <andreas@enge.fr> | 2026-02-14 10:18:12 +0100 |
| commit | eec58c78fd42f13f823e78fcda5ec7edfdc60a3c (patch) | |
| tree | 2c4f1e336b98e3572d3b747faca8077f7116dae4 /gnu/packages | |
| parent | d664fadd7e0b8920f6775ce9330a31ffea6fb2c5 (diff) | |
gnu: r-bedr: Update to 1.1.5.
* gnu/packages/cran.scm (r-bedr): Update to 1.1.5.
[arguments]: Enable all but one test; add phase 'skip-bad-tests.
Change-Id: I498d319c2f61b7d8c047c132cfe2327638cedf0c
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/cran.scm | 17 |
1 files changed, 13 insertions, 4 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index c6d8f7bdce4..2b834c508d3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -36026,17 +36026,26 @@ whole genome approach to detecting significant QTL in linkage maps.") (define-public r-bedr (package (name "r-bedr") - (version "1.1.3") + (version "1.1.5") (source (origin (method url-fetch) (uri (cran-uri "bedr" version)) (sha256 (base32 - "1mxscr02n81jcwmw4rzmixwvcipjv018gdaqigyvis0p7y0iras7")))) + "1r4zd7fg7z8bvc06dry9avqnym2kyi3pr1i3zfyglc5has5wg3f0")))) (build-system r-build-system) - ;; FIXME Tests fail with: could not find function "context" - (arguments (list #:tests? #false)) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'skip-bad-tests + (lambda _ + ;; FIXME This test fails with: object 'a.b.overlap.sorted' not + ;; found. + (substitute* "tests/testthat/test-in.region.R" + ((".*check in.region.*" m) + (string-append m "skip('skip');\n")))))))) (propagated-inputs (list r-data-table r-r-utils |