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| author | Hugo Buddelmeijer <hugo@buddelmeijer.nl> | 2026-03-16 22:43:32 +0100 |
|---|---|---|
| committer | Sharlatan Hellseher <sharlatanus@gmail.com> | 2026-03-18 22:39:42 +0000 |
| commit | 81cb51f3b7c2c317e66cd1d47cbb6ef4f026c0b5 (patch) | |
| tree | 78cf00ea21d045782bf7f6088f731722280dea6b /gnu/packages | |
| parent | d840bb186373a3027dbdecbc372d51c2003861af (diff) | |
gnu: python-metacells: Fix build.
* gnu/packages/bioinformatics.scm (python-metacells): Fix build.
[arguments]<#:phases>: Add pre-sanity-check phase.
[homepage]: Update with redirect.
Change-Id: I9e6c2dfd4d944a589f87716ab8347a161ff630c5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index ec5af920058..8606bdb180a 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3241,7 +3241,11 @@ and gene expression visualization.") (lambda _ ;; Numba needs a writable dir to cache functions. (setenv "NUMBA_CACHE_DIR" "/tmp") - (delete-file-recursively "metacells")))))) + (delete-file-recursively "metacells"))) + (add-before 'sanity-check 'pre-sanity-check + (lambda _ + ;; Numba needs a writable dir to cache functions. + (setenv "NUMBA_CACHE_DIR" "/tmp")))))) (propagated-inputs (list python-anndata python-cvxpy python-fastcluster @@ -3255,7 +3259,7 @@ and gene expression visualization.") python-threadpoolctl python-umap-learn)) (native-inputs (list pybind11-2 python-pytest python-setuptools)) - (home-page "https://github.com/tanaylab/metacells.git") + (home-page "https://github.com/tanaylab/metacells") (synopsis "Single-cell RNA Sequencing Analysis") (description "The metacells package implements the improved metacell algorithm for single-cell RNA sequencing (scRNA-seq) data analysis within the |