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| author | Ricardo Wurmus <rekado@elephly.net> | 2026-02-20 14:10:53 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2026-02-20 14:15:00 +0100 |
| commit | 1b17e46a9b7c225a75b623890057d6f5f8ca3e5c (patch) | |
| tree | 4287f87ee8626dae2494cc3431fc96d9baabde10 /gnu/packages | |
| parent | ce7b0bd514745eff2078837389091deae1eabb56 (diff) | |
gnu: r-voltron: Skip bad tests.
* gnu/packages/bioinformatics.scm (r-voltron)[arguments]: Add phase
'skip-bad-tests.
Change-Id: I51b33fd613f9eb744b4fd51400cad55e5b2c65ef
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9623dd6d4b1..ad15af0af26 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -22980,6 +22980,14 @@ patterns.") (string-append "source(paste0(system.file(package=\"VoltRon\"), \"/guix-refs.R\"));\n" "return(guix_python);"))))) + (add-after 'unpack 'skip-bad-tests + (lambda _ + (with-directory-excursion "tests/testthat" + (substitute* "test_conversion.R" + ((".*as.AnnData, python path.*" m) + (string-append m "skip('skip');\n")) + ((".*as.ometiff, python path.*" m) + (string-append m "skip('skip');\n")))))) ;; We do this outside of the source code to ensure that ;; references are accessible to Guix. (add-after 'install 'record-python-reference |