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authorRicardo Wurmus <rekado@elephly.net>2025-11-25 13:50:45 +0100
committerRicardo Wurmus <rekado@elephly.net>2025-11-29 12:21:27 +0100
commit9c6512c77e12f69a99fba2d6102c2f6add644452 (patch)
tree97ea0c1394cc6b0a783903818dbe44fadbb947ed
parent0d5bd5b048926cd5ad30deeaf63e41fef5d13a2a (diff)
gnu: r-bgeecall: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.26.0. [propagated-inputs]: Remove r-biomart; add r-annotationdbi, r-curl, r-ggplot2, r-iranges, r-rcurl, r-readr, r-rsqlite, r-scales, r-spatstat-univar, and r-stringr. Change-Id: I7e4d779eb12bbbd69578c096053bd3dd4f6f74d9
-rw-r--r--gnu/packages/bioconductor.scm16
1 files changed, 13 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3ca1d34c939..27743cc2c84 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -27523,14 +27523,14 @@ real numbers.")
(define-public r-bgeecall
(package
(name "r-bgeecall")
- (version "1.24.0")
+ (version "1.26.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BgeeCall" version))
(sha256
(base32
- "0fjqwnaq26dzca4n3d7nsq8psim2k8vq6l6gdz11psf805k60hdl"))))
+ "1ql6id4l1qchavywbarj0c5vc8j7ars34br9wb4s66is68bb688p"))))
(properties
'((upstream-name . "BgeeCall")
(updater-extra-propagated-inputs . ("kallisto"))))
@@ -27539,16 +27539,26 @@ real numbers.")
(build-system r-build-system)
(propagated-inputs
(list kallisto
- r-biomart
+ r-annotationdbi
r-biostrings
+ r-curl
r-data-table
r-dplyr
r-genomicfeatures
+ r-ggplot2
+ r-iranges
r-jsonlite
+ r-rcurl
+ r-readr
r-rhdf5
r-rslurm
+ r-rsqlite
r-rtracklayer
+ r-scales
+ r-sjmisc
r-sjmisc
+ r-spatstat-univar
+ r-stringr
r-txdbmaker
r-tximport))
(native-inputs (list r-annotationhub r-httr r-knitr r-testthat))