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| author | Cayetano Santos <csantosb@inventati.org> | 2025-12-08 10:58:19 +0100 |
|---|---|---|
| committer | Cayetano Santos <csantosb@inventati.org> | 2025-12-12 11:55:01 +0100 |
| commit | 75016a2ee813b80314b75b31026d790318d64284 (patch) | |
| tree | 2b64157091e9fc94c9799c5893de219d37665626 | |
| parent | 243bc427688188f4b4cbcbd9295c7142320224ea (diff) | |
gnu: python-lifelines: Compute parallel tests.
* gnu/packages/statistics.scm (python-lifelines)[native-inputs]: Add
python-pytest-xdist.
[arguments]: Add --numprocesses flag to #:test-flags, and remove very
slow tests.
Change-Id: Ib2ecc8bec37d9a7f95f992d8af160283b5abe881
| -rw-r--r-- | gnu/packages/statistics.scm | 21 |
1 files changed, 16 insertions, 5 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 00d8ee5fa73..25e7e69e898 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1313,16 +1313,27 @@ new data from those PDFs.") (list #:test-flags ;; NOTE: Tests take 15-25min to complete on 16 threads and much longer - ;; in single one, consider to try enabling --numprocesses option. - #~(list ;; "--numprocesses" (number->string (parallel-job-count)) - ;; This accuracy test fails because 0.012 is not < 0.01. - "-k" "not test_weibull_with_delayed_entries"))) + ;; in single one, so enabling --numprocesses option. + #~(list "lifelines/tests" + "--numprocesses" (number->string (min 16 (parallel-job-count))) + "-k" (string-join + (list + ;; This accuracy test fails because 0.012 is not < 0.01. + "not test_weibull_with_delayed_entries" + ;; These checks are too expensive, last for ages. + "test_univariate_fitters_ok_if_given_timedelta" + "test_predict_methods_returns_a_scalar_or_a_array_depending_on_input" + "test_cumulative_density_ci_is_ordered_correctly" + (string-append + "test_univariate_fitters_okay_if_" + "given_boolean_col_with_object_dtype")) + " and not ")))) (native-inputs (list python-dill python-flaky python-joblib python-pytest - ;; python-pytest-xdist + python-pytest-xdist ;see NOTE above python-setuptools python-wheel)) (propagated-inputs |