From e994eb8b648464dbcb409c20c7fd8e0b7972b689 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 4 Mar 2026 13:25:30 +0100 Subject: gnu: r-singlet: Update to 0.99.8-1.ef4a374. Yes, this is an update, even though the patch level used to be .26 and now is .8. That's post-semantic versioning. * gnu/packages/bioinformatics.scm (r-singlet): Update to 0.99.8-1.ef4a374. [propagated-inputs]: Add r-statmod. Change-Id: I95d1d60966c68cb8f66d79b6af6cab82bcf16a62 --- gnu/packages/bioinformatics.scm | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) (limited to 'gnu') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index fab67e01a4d..68d46178850 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1694,11 +1694,11 @@ the mutation counts.") (license license:gpl3))) (define-public r-singlet - (let ((commit "765a6c45081807a1522f0e8983e2417822a36f36") + (let ((commit "ef4a374f27681477b95d856b74bd3cbbb379308d") (revision "1")) (package (name "r-singlet") - (version (git-version "0.99.26" revision commit)) + (version (git-version "0.99.8" revision commit)) (source (origin (method git-fetch) (uri (git-reference @@ -1707,7 +1707,7 @@ the mutation counts.") (file-name (git-file-name name version)) (sha256 (base32 - "040v8wzl9qr8ribr6qss61fz4698d14cqs8nxbc8hqwiqlpy3vs4")))) + "1s9g3i0ypsnpnal40f223d5lzijxchwaf1kvavyijl75zaj8i6af")))) (properties `((upstream-name . "singlet"))) (build-system r-build-system) (propagated-inputs (list r-dplyr @@ -1718,10 +1718,12 @@ the mutation counts.") r-matrix r-msigdbr r-rcpp + ;; See https://github.com/zdebruine/singlet/issues/25 r-rcppml/devel r-reshape2 r-scuttle - r-seurat)) + r-seurat + r-statmod)) (native-inputs (list r-knitr r-testthat)) (home-page "https://github.com/zdebruine/singlet") (synopsis "Non-negative Matrix Factorization for single-cell analysis") -- cgit v1.3