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2016-12-29gnu: python-numexpr: Update to 2.6.1.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-numexpr): Update to 2.6.1.
2016-12-29gnu: python-babel: Update to 2.3.4.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-babel): Update to 2.3.4.
2016-12-27gnu: Add python-netcdf4.Thomas Danckaert
* gnu/packages/python.scm (python-netcdf4, python2-netcdf4): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-26gnu: python-pycrypto: Add TODO "removal" comment.Leo Famulari
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto): Add comment.
2016-12-26gnu: python-stem: Don't use python-pycrypto.Leo Famulari
Python-pycrypto is an optional dependency of python-stem. Python-pycrypto is unmaintained [0] and contains an exploitable buffer overflow bug [1]. [0] https://github.com/dlitz/pycrypto/issues/173 [1] https://github.com/dlitz/pycrypto/issues/176 * gnu/packages/python.scm (python-stem, python2-stem)[propagated-inputs]: Remove python-pycrypto.
2016-12-26gnu: python-stem: Update to 1.5.3.Leo Famulari
* gnu/packages/python.scm (python-stem, python2-stem): Update to 1.5.3. [source]: Update URL.
2016-12-23gnu: Add python-hdf4.Thomas Danckaert
* gnu/packages/python.scm (python-hdf4, python2-hdf4): New variables. Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-12-22gnu: python-scikit-learn: Update to 0.18.1.Ricardo Wurmus
* gnu/packages/python.scm (python-scikit-learn): Update to 0.18.1. [arguments]: Remove special "check" phase. [native-inputs]: Add python-cython.
2016-12-19gnu: Add python-xopen.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-xopen, python2-xopen): New variables.
2016-12-18gnu: python-docutils: Update to 0.13.1Hartmut Goebel
* gnu/packages/python.scm(python-docutils): Update to 0.13.1. [source]: Use pypi-uri.
2016-12-16gnu: python-beautifulsoup4: Fix python2 variant.Marius Bakke
This is a followup to 5f37f0b66e301210698ab0c0af24453c826ba18a. * gnu/packages/python.scm (python-beautifulsoup4)[properties]: New field. Delay python2 variant.
2016-12-16gnu: python2-kombu: Disable tests.Marius Bakke
* gnu/packages/python.scm (python2-kombu)[arguments]: Set #:tests? #f.
2016-12-16gnu: python-pyopenssl: Enable tests.Marius Bakke
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl)[source]: Use it. [arguments]: Replace 'check' with custom phase.
2016-12-16gnu: ptpython: Disable tests.Marius Bakke
* gnu/packages/python.scm (ptpython, ptpython2)[arguments]: Set #:tests? #f.
2016-12-16gnu: python-sympy: Update to 1.0.Marius Bakke
* gnu/packages/python.scm (python-sympy, python2-sympy): Update to 1.0. [propagated-inputs]: Add python-mpmath.
2016-12-16gnu: Add python-mpmath.Marius Bakke
* gnu/packages/python.scm (python-mpmath, python2-mpmath): New variables.
2016-12-16gnu: python-apsw: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-apsw, python2-apsw)[arguments]: Use 'modify-phases'. Add installed PYTHONPATH before running tests.
2016-12-16gnu: python-argcomplete: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-argcomplete, python2-argcomplete)[native-inputs]: Add python-pexpect and tcsh.
2016-12-16gnu: python-widgetsnbextension: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-widgetsnbextension, python2-widgetsnbextension)[native-inputs]: Add python-certifi.
2016-12-16gnu: python-pexpect: Update to 4.2.1.Marius Bakke
* gnu/packages/python.scm (python-pexpect, python2-pexpect): Update to 4.2.1. [source]: Use 'pypi-uri'. [arguments]: Add 'prepare-tests' phase to patch paths and delete network test. [native-inputs]: Add python-pytest, man-db and which. [propagated-inputs]: Add python-ptyprocess.
2016-12-16gnu: python-axolotl: Remove workaround for bug #20765.Marius Bakke
* gnu/packages/python.scm (python-axolotl, python2-axolotl)[arguments]: Remove #:configure-flags.
2016-12-16gnu: Remove python-dateutil@1.5.Marius Bakke
* gnu/packages/python.scm (python-dateutil-2, python2-dateutil-2): Rename to ... (python-dateutil, python2-dateutil): ... this. Remove 1.5 version. (python-tzlocal, python2-tzlocal): Adjust variable name. (python-rst.linker, python2-rst.linker): Likewise. (pelican): Likewise. (python-matplotlib, python2-matplotlib): Likewise. (python-sqlalchemy-utils, python2-sqlalchemy-utils): Likewise. (python-icalendar, python2-icalendar): Likewise. (python-botocore, python2-botocore): Likewise. (python-vobject, python2-vobject): Likewise. (python-arrow, python2-arrow): Likewise. (python-fake-factory, python2-fake-factory): Likewise. (python-freezegun, python2-freezegun): Likewise. (python-aniso8601, python2-aniso8601): Likewise. * gnu/packages/jrnl.scm (jrnl): Likewise. * gnu/packages/calendar.scm (limnoria): Likewise.
2016-12-15gnu: python-flask-restplus: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-flask-restplus)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-gridmap: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-gridmap, python2-gridmap)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-hy: Fix test suite.Marius Bakke
* gnu/packages/python.scm (python-hy, python2-hy)[arguments]: Replace 'check' phase with custom command. [native-inputs]: Add python-coverage and python-nose.
2016-12-15gnu: python-py3status: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-py3status)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-pyserial: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-pyserial, python2-pyserial)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-pystache: Disable tests for python3 variant.Marius Bakke
* gnu/packages/python.scm (python-pystache)[arguments]: Disable tests. [properties]: New field. Delay python2 variant. (python2-pystache)[arguments]: Replace 'check' phase with custom command.
2016-12-15gnu: python-pytest-xdist: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-pytest-xdist, python2-pytest-xdist)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-rpy2: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-rpy2, python2-rpy2)[arguments]: Replace check phase with custom post-install command.
2016-12-15gnu: python-seaborn: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-seaborn, python2-seaborn)[arguments]: Disable tests.
2016-12-15gnu: python-sqlalchemy-utils: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-sqlalchemy-utils, python2-sqlalchemy-utils)[arguments]: Set #:tests? #f. [native-inputs]: Add python-dateutil-2, python-flexmock, python-pcycopg2 and python-pytz.
2016-12-15gnu: python-oauthlib: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-oauthlib)[native-inputs]: Add python-mock. (python2-oauthlib)[native-inputs]: Inherit python-mock.
2016-12-15gnu: python-paramiko: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-paramiko, python2-paramiko)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-termstyle: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-termstyle)[arguments]: Replace 'check' phase with custom command.
2016-12-15gnu: python-twisted: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-twisted, python2-twisted)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-zope-security: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-security, python2-zope-security)[arguments]: Set #:tests? #f. [native-inputs]: Add python-six.
2016-12-15gnu: python-zope-location: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-location, python2-zope-location)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-zope-proxy: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-proxy, python2-zope-proxy)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-zope-configuration: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-configuration, python2-zope-configuration)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-zope-interface: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-schema, python2-zope-schema)[arguments]: Set #:tests? #f.
2016-12-15gnu: python-zope-testrunner: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-zope-testrunner, python2-zope-testrunner)[arguments]: Set #:tests? #f.
2016-12-15gnu: snakemake: Update to 3.9.0.Marius Bakke
* gnu/packages/python.scm (snakemake): Update to 3.9.0. [source]: Use 'pypi-uri'. [arguments]: Disable tests. [home-page]: Update.
2016-12-15gnu: python-ly: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-ly): Set #:tests? #f.
2016-12-14gnu: python-scikit-image: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-scikit-image, python2-scikit-image)[arguments]: Set #:tests? #f.
2016-12-14gnu: python-jedi: Disable tests.Marius Bakke
* gnu/packages/python.scm (python-jedi, python2-jedi)[arguments]: Disable tests. [native-inputs]: Add python-pytest.
2016-12-14gnu: python-clint: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-clint, python2-clint)[native-inputs]: Add python-pytest. [arguments]: Replace 'check' phase with custom command.
2016-12-14gnu: python-fake-factory: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-fake-factory, python2-fake-factory)[arguments]: Replace 'check' phase with custom command.
2016-12-14gnu: python-mock: Update source and home-page URIs.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-mock)[source]: Use ‘pypi-uri’. [home-page]: Replace dead Google Code home page.
2016-12-14gnu: python-pyaml: Fix tests.Marius Bakke
* gnu/packages/python.scm (python-pyaml, python2-pyaml)[native-inputs]: Add python-unidecode.
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