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2025-10-01gnu: python-murmurhash: Move to pyhton-crypto.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-murmurhash): Move from here ... * gnu/packages/python-crypto.scm: ... to here. * gnu/packages/machine-learning.scm: Add python-crypto module. Change-Id: I59a26e82622112736b5a331dd948d9aa91255207
2025-09-30gnu: python-flit-core-next: Mark as deprecated.Nguyễn Gia Phong
This is a followup to a34d8e427875e0538a81e4414e92cc41c91fd0cf. Replace all python-flit-core-next occurrences with python-flit-core. * gnu/packages/python-build.scm (python-flit-core-next): Mark as a deprecated public alias. * gnu/packages/machine-learning.scm (python-pytorch-geometric) [propagated-inputs]: Replace python-flit-core-next with python-flit-core. * gnu/packages/pdf.scm (python-pypdf) [propagated-inputs]: Replace python-flit-core-next with python-flit-core. * gnu/packages/python-check.scm (python-stestr) [propagated-inputs]: Replace python-flit-core-next with python-flit-core. * gnu/packages/python-xyz.scm (python-asyncclick) [propagated-inputs]: Replace python-flit-core-next with python-flit-core. Change-Id: I3a25290f6fd97995b773332addefe33afd016e67 Reviwed-by: Ludovic Courtès <ludo@gnu.org> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-26gnu: nerd-dictation: Fix tests.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (nerd-dictation)[arguments] <test-backend>: Use 'custom. <test-flags>: Provide the path to test file. [native-inputs]: Remove python-wheel. Change-Id: Ia6e2c497ffe9315a87dc20b4d845fea111a144c9
2025-09-25gnu: fasttext: Fix build.Nicolas Graves
* gnu/packages/machine-learning.scm (fasttext): [arguments]<#:phases>: Add phase 'gcc-14-fix. Change-Id: Ib3f4a49b65e84f75f182637764fb54e24f3a5b5b Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25gnu: python-dlib: Fix tests.Nicolas Graves
* gnu/packages/machine-learning.scm (python-dlib): [arguments]: Improve style. [native-inputs]: Sort them. Add python-pytest. Change-Id: Ie6223d3d635d96e813897431e2389cbdf9776b75 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25gnu: python-hdbscan: Update to 0.8.40.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-hdbscan): Update to 0.8.40. [arguments] <test-flags>: Ignore 3 test files. <phases>: Add 'pre-check. [native-inputs]: Remove python-nose, python-pandas, python-networkx, and python-wheel; add python-numpy. Change-Id: I38813d1cc16d4e90b5f0875dc93728bb42f4fa5d
2025-09-25gnu: python-lightning-utilities: Disable tests.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-lightning-utilities)[arguments] <tests?>: Most tests are broken. [native-inputs]: Remove python-wheel. Change-Id: I73e90cadff07d662e43dfced6227f0023382b76c
2025-09-25gnu: python-gpy: Fix tests.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-gpy)[arguments] <test-flags>: Ignore 2 test files. Change-Id: Ic529f0e913aaa7977503476f812c1d1293f5d2fc
2025-09-25gnu: python-hopcroftkarp: Fix tests.Nicolas Graves
* gnu/packages/machine-learning.scm (python-hopcroftkarp)[arguments] <#:test-backend>: Set it. Change-Id: I024ae8e72e7cecb2088eed1002ab0b2428ca732d Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25gnu: python-setuptools-next: Set to python-setuptools.Sharlatan Hellseher
Replace all python-setuptools-next occurrences with python-setuptools. * gnu/packages/python-build.scm (python-setuptools-next): Set to python-setuptools. Change-Id: I9e5e0881310d160ec56be785f2dd2140364fa8e5
2025-09-25gnu: python-pytorch: Adjust inputs.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-pytorch) [native-inputs]: Remove python-pytest-rerunfailures-13; add python-pytest-rerunfailures. Change-Id: I5c259c9c787e101aaca514055856097aa9de5449
2025-09-25gnu: python-scikit-learn: Update to 1.7.0.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.7.0. Change-Id: Ic269673b9a7d6d190edfd98ad9744f9f4955241a
2025-09-20gnu: Add python-tflite-runtime.Nicolas Graves
Add this dummy package for future pypi imports. * gnu/packages/machine-learning.scm (python-tflite-runtime): New variable. Change-Id: Ia9719eb5aabb897c29bef6861f219db664947185 Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-20gnu: tensorflow-lite: Add python output.Nicolas Graves
This output corresponds to the pypi "tflite-runtime" package. * gnu/packages/machine-learning.scm (tensorflow-lite): [outputs]: Add "python". [arguments]<#:imported-modules, #:modules>: Add pyproject modules. <#:phases>: Add 'build-python, 'install-python, 'add-install-to-pythonpath and 'python-sanity-check phases. [inputs]: Replace python by python-wrapper. Add zlib. [propagated-inputs]: Add python-numpy. [native-inputs]: Add pybind11, python-wheel, swig. Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-20gnu: tensorflow-lite: Update to 2.14.0.Nicolas Graves
* gnu/packages/patches/tensorflow-lite-unbundle.patch: Remove it. * gnu/local.mk: De-register patch. * gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.14.0. [source]: De-register patch. [inputs]: Improve style. Add python-ml-dtypes. Replace flatbuffers-23.1 by flatbuffers-23.5. [arguments]<#:configure-flags>: Refresh them. <#:phases>: Add phases 'unbundle and 'gemmlowp-fix. Refresh phases 'install-extra and 'copy-sources. * gnu/packages/serialization.scm (flatbuffers-23.5): Update comment. Change-Id: Ifeadfaa9173df4e0be08ce4f0dc13a4cd5297c0e Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-20gnu: Add python-ml-dtypes.Nicolas Graves
* gnu/packages/machine-learning.scm (python-ml-dtypes): New variable. Change-Id: I127edac9317d6380d22c41b6c6d578e183ab6b9f Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-20gnu: gemmlowp: Improve style.Nicolas Graves
* gnu/packages/machine-learning.scm (gemmlowp) [source, arguments, home-page]: Improve style. Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-20gnu: gemmlowp: Update to commit 16e8662.Andy Tai
* gnu/packages/machine-learning.scm (gemmlowp): Update to commit 16e8662. Change-Id: Iaa23a7cf5196f1c825c4330b1c7262f434565745 Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-18Reapply "Update Maxim's email address."Maxim Cournoyer
This reverts commit a7db92d9b389cbe565395523882c34c6eff2c21a, this time with the more careful command, to avoid a world rebuild: grep -rl --exclude-dir=build --exclude-dir=patches --exclude=ld-wrapper.in \ --exclude=sitecustomize.py --exclude=guix-emacs.el maxim.cournoyer@gmail.com | xargs sed -i 's/maxim.cournoyer@gmail.com/maxim@guixotic.coop/g' Change-Id: I0871f5cf9ace79e34e78e24154d0da6ea95a3a91
2025-09-18Revert "Update Maxim's email address."Maxim Cournoyer
This reverts commit d0d87a744d724b7e7d5ac013c586039652087bb3. Oops! This caused a world rebuild. Change-Id: I25fff644b2b61d0ee93d69b457b04c72b5b74d15
2025-09-18Update Maxim's email address.Maxim Cournoyer
The change was automated via: git grep -l maxim.cournoyer@gmail.com | xargs sed -i 's/maxim.cournoyer@gmail.com/maxim@guixotic.coop/g' * .mailmap: New entry. Change-Id: Iaa88b1e51c94159c49138fb43910badb990eb169
2025-09-15gnu: Remove gemmlowp-for-tensorflow.Andreas Enge
* gnu/packages/machine-learning.scm (gemmlowp-for-tensorflow): Delete variable. Change-Id: I034392fcb7b9ef327253e260aa88db57f7b4a9ac
2025-09-14gnu: Remove tensorflow.Andreas Enge
* gnu/packages/machine-learning.scm (tensorflow): Delete variable. Change-Id: I1db4876ebe71407e883b970342f5f1a13ef1d28d
2025-09-14gnu: Remove guile-aiscm.Andreas Enge
* gnu/packages/machine-learning.scm (guile-aiscm): Delete variable. Change-Id: I0f21c21aa4bc651a507d452099bc7cc603e3821d
2025-09-14gnu: Remove guile-aiscm-next.Andreas Enge
* gnu/packages/machine-learning.scm (guile-aiscm-next): Delete variable. Change-Id: I209c1efa45c938ef95241b7073f8154156d5d16d
2025-09-10gnu: python-scikit-rebate: Switch to pyproject.Cayetano Santos
* gnu/packages/machine-learning.scm (python-scikit-rebate)[build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-setuptools-next. Change-Id: I9b4767dd3593aadb43195ac6589db4ad3c7e6a30 Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-09gnu: python-sentencepiece: Switch to pyproject.Cayetano Santos
* gnu/packages/machine-learning.scm (python-sentencepiece)[build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-pytest and python-setuptools-next. Change-Id: Ib675129d61eb960f45b0f34e30fa1ecd768f9cab Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-07gnu: python-visdom: Update to 0.2.4.Cayetano Santos
* gnu/packages/machine-learning.scm (python-visdom): Update to 0.2.4. [build-system]: Switch to pyproject-build-system. [arguments]: Disable tests. [propagated-inputs]: Remove python-pyzmq and python-torchfile; add python-networkx. [native-inputs]: Add python-setuptools-next. Change-Id: I29123904158ac95018e2e0a4897e693d8fab973b Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-07gnu: python-torchfile: Update to 0.1.0-0.fbd434a.Cayetano Santos
* gnu/packages/machine-learning.scm (python-torchfile): Update to 0.1.0-0.fbd434a. [source]: Switch to git-fetch to obtain the latest changes and enable tests. [build-system]: Switch to pyproject-build-system. [arguments]: Enable tests. [propagated-inputs]: Add python-setuptools-next. Change-Id: I02f94fa4e3b78fd1d3e8e3e80ce3f16fd56e38fa Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-07gnu: python-iml: Switch to pyproject.Cayetano Santos
* gnu/packages/machine-learning.scm (python-iml)[build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-setuptools-next. Change-Id: I417fb03117866821f20b8febaa4599339cd645d2 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-05gnu: Remove rxcpp.Andreas Enge
* gnu/packages/machine-learning.scm (rxcpp): Delete variable. Fixes: guix/guix#1838 Change-Id: I4cd797430bacc52bba9d41d520d41e2268b5160c
2025-09-04gnu: python-pytorch-lightning: Fix build.Sharlatan Hellseher
* gnu/packages/machine-learning.scm (python-pytorch-lightning) [native-inputs]: Add python-setuptools-next. Change-Id: Ie654b8a6193c835e0b1a8f2368817caef3e77f5b
2025-09-04gnu: Add python-torchaudio.Nicolas Graves
* gnu/packages/machine-learning.scm (python-torchaudio): New variable. Change-Id: I841ccbdcdd5b086d5bb5905d8857fa57e49605c4 Reviewed-by: Cayetano Santos <csantosb@inventati.org> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-04gnu: python-pytorch: Fix Caffe2 cmake-bound dependents.Nicolas Graves
Caffe2Targets.cmake has httplib::httplib but it doesn't seem imported anywhere beforehand. For me, this broke the build of python-torchaudio. Also add a few minor improvements. * gnu/packages/machine-learning.scm (python-pytorch)[arguments] <#:phases>: Improve phase 'cmake-patches (using site-packages and search-input-directory). Ensure httplib:httplib is defined when used. Improve phases 'remove-caffe2-onnx-scripts. Change-Id: If2cb3da00e579db2e22f734261ebfa30f15880c7 Reviewed-by: Cayetano Santos <csantosb@inventati.org> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-03gnu: sentencepiece: Update to 0.2.1.Cayetano Santos
* gnu/packages/machine-learning.scm (sentencepiece): Update to 0.2.1. [source]: Switch to git-fetch. Change-Id: Ic5d8caa05355e2a87be0bbbb1ca16a62bcd6ce14 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: python-sentencepiece: Inherit from sentencepiece.Cayetano Santos
* gnu/packages/machine-learning.scm (python-sentencepiece): Inherit from sentencepiece. [arguments]: Add chdir #:phase. [native-inputs]: Add protobuf. [home-page]: Remove. [license]: Remove. Change-Id: I1072520b6786ded284cc28043fcfb356f748767e Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: openmm: Update to 8.3.1.Cayetano Santos
* gnu/packages/machine-learning.scm (openmm): Update to 8.3.1. Change-Id: Iccb86d75fd931959da1e004e6d9715dcc35e936d Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: libsvm: Update to 3.36.Cayetano Santos
* gnu/packages/machine-learning.scm (libsvm)[source]: Switch to git-fetch. [arguments]: Use G-Expressions. <#:phases>{install}: Simplify. * gnu/packages/machine-learning.scm (python-libsvm)[build-system]: Switch to pyproject-build-system. <#:phases>: Add chdir. [native-inputs]: Add python-setuptools, python-wheel. [propagated-inputs]: Add libsvm, python-scipy. * gnu/packages/bioinformatics.scm (seek)[arguments]: Adapt #:configure-flags accordingly. Change-Id: Icf9f1081f037fb2fcda999a0c22e20d75d63c8c0 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: fann: Update to 2.2.0-2.1783cbf.Cayetano Santos
* gnu/packages/machine-learning.scm (fann): Update to 2.2.0-2.1783cbf. [version]: Modernize. [source]: Modernize, delete bundled googletest. [arguments]: Use G-Expressions. <#:phases>: Remove remove-googletest, modernize check. [native-inputs]: Add googletest. [home-page]: Update. Change-Id: If3b2fa1e28633129dfeba87630ddc5478dd77291 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: python-umap-learn: Update to 0.5.9.Cayetano Santos
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.9. Change-Id: I343a88b7e18b58e6510317109b00ca55788f08c0 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: dmlc-core: Improve style.Cayetano Santos
* gnu/packages/machine-learning.scm (dmlc-core)[arguments]: Use G-Expressions. [native-inputs]: Modernize. Change-Id: I9c43a02bc9575a971dd717de606cb800f295add4 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: python-botorch: Update to 0.15.1.Cayetano Santos
* gnu/packages/machine-learning.scm (python-botorch): Update to 0.15.1. Change-Id: I67b874c59ca2f67b41491ea514854da07eddfcfb Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: python-faster-whisper: Update to 1.2.0.Cayetano Santos
* gnu/packages/machine-learning.scm (python-faster-whisper): Update to 1.2.0. Change-Id: I24ff0b18e3b4ef4d3e6597e748d6b2203c4034d6 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: dlpack: Update to 1.1.Cayetano Santos
* gnu/packages/machine-learning.scm (dlpack): Update to 1.1. [home-page]: Update. Change-Id: Ib9b02dd9bbfc9a7aba690dfad3e6b9bd2c26a7b0 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-09-03gnu: nerd-dictation: Update to 0-2.03ce043.Cayetano Santos
* gnu/packages/machine-learning.scm (nerd-dictation): Update to 0-2.03ce043. Change-Id: I45b6f5e517d2fd0a21b3a426af3377bf981ffe47 Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
2025-08-29gnu: tensorflow-lite: Enable xnnpack dependency.Andy Tai
* gnu/packages/machine-learning.scm (tensorflow-lite)[inputs]: Add xnnpack. [arguments]<#:tests>: Enable tests. [arguments]<#:configure-flags>: Add flags to enable xnnpack. Change-Id: I434d209fe3db4c8944bf07217a472d8545f96ee0 Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-08-25gnu: tensorflow-lite: Fix build.Andy Tai
* gnu/packages/machine-learning.scm (tensorflow-lite): Fix build. [inputs]: Replace old abseil-cpp with current version. [phases]: Add stages to patch sources for build with current versions of abseil-cpp and opencl. Change-Id: I8fb2836d9f2337fb01f81aebc9a3ab6ae08e642a Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-08-24gnu: python-readchar: Update to 4.2.1.Cayetano Santos
* gnu/packages/machine-learning.scm (python-readchar): Update to 4.2.1. [source]: Switch to git-fetch, providing test data. [arguments]: Use G-Expressions; remove delete-windows-file #:phase. [propagated-inputs]: Remove python-setuptools. [native-inputs]: Remove python-wheel; add python-pytest, python-pytest-cov and python-setuptools-next. Change-Id: I6b60de788301c699713504425db08c6e29de3c9d Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-08-24gnu: python-persim: Update to 0.3.8.Cayetano Santos
* gnu/packages/machine-learning.scm (python-persim): Update to 0.3.8. [native-inputs]: Remove python-pytest-cov, python-setuptools, and python-wheel; add python-setuptools-next. Change-Id: I50931695a928cc12deb5d445de97d71c7a14ff2b Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-08-23gnu: python-autograd: Update to 1.8.0.Cayetano Santos
* gnu/packages/machine-learning.scm (python-autograd): Update to 1.8.0. [native-inputs]: Add python-pytest-cov, python-pytest-xdist. Change-Id: I7c1a0aa0f415ca00891ad8e3121b6d733ae41820 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>